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See:
Description
Packages | |
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org.gersteinlab.coevolution.core.config | Contains classes for configurating the programs. |
org.gersteinlab.coevolution.core.data | Contains classes for configurating handling data. |
org.gersteinlab.coevolution.core.io | Contains classes for IO operations. |
org.gersteinlab.coevolution.core.stat | Contains classes for coevolution score computations. |
org.gersteinlab.coevolution.core.tasks | Contains classes that define the main tasks of a coevolution study. |
org.gersteinlab.coevolution.core.util | Contains supporting utility classes. |
org.gersteinlab.coevolution.inter | Contains classes for performing inter-protein analysis. |
org.gersteinlab.coevolution.intra | Contains classes for performing intra-protein analysis. |
org.gersteinlab.coevolution.web | Contains classes for performing analysis through the web interface. |
This package contains Java classes for the analysis of residue coevolution in proteins. It provides methods for downloading and preprocessing data, computing coevolution scores, and plotting and analyzing results.
There are three ways to use the classes:
This API documentation is mainly for the third group of users, who need to understand how the API is defined and what the classes actually do.
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